With the data you attached, I created a VBA sample to fix the "Bad Body" issue,  you can open the B114QC11111.ipt and run the code to check if it solves the problem:
 
Sub FixBadBodyIssueInSheetMetal()
    Dim oDoc As PartDocument
    Set oDoc = ThisApplication.ActiveDocument
    
    Dim oSMDef As SheetMetalComponentDefinition
    Set oSMDef = oDoc.ComponentDefinition
    
    Dim oFaceFeature As FaceFeature
    Set oFaceFeature = oSMDef.Features.FaceFeatures(1)
    
    Dim oSk As PlanarSketch
    Set oSk = oFaceFeature.Definition.Profile.Parent
    
    Dim oFace As Face, oNormal As UnitVector, oOffsetFace As Face
    For Each oFace In oFaceFeature.Faces
        Set oNormal = oFace.Geometry.Normal
        
        If oNormal.IsParallelTo(oSk.PlanarEntityGeometry.Normal) Then
            Set oOffsetFace = oFace
            Exit For
        End If
    Next
    
    Dim oFaces As FaceCollection
    Set oFaces = ThisApplication.TransientObjects.CreateFaceCollection
    oFaces.Add oOffsetFace
    
    Dim oOffsetSur As ThickenFeature
    Set oOffsetSur = oSMDef.Features.ThickenFeatures.Add(oFaces, 0, kPositiveExtentDirection, kSurfaceOperation, True)
     
    Dim oDeleteFace As DeleteFaceFeature
    Set oDeleteFace = oSMDef.Features.DeleteFaceFeatures.Add(oOffsetFace.FaceShell)
    
    Set oFaces = ThisApplication.TransientObjects.CreateFaceCollection
    oFaces.Add oOffsetSur.Faces(1)
    
    Dim dThickness As Double
    Debug.Print oSMDef.Thickness.Expression
    
    Dim oThicken As ThickenFeature
    Set oThicken = oSMDef.Features.ThickenFeatures.Add(oFaces, oSMDef.Thickness.Expression, kNegativeExtentDirection, kJoinOperation, True)
    
    oOffsetSur.SurfaceBodies(1).Visible = False
End Sub
 
The code will delete the problematic Brep and create a new one, this will create some new features but should be unfoldable as before. Also if you have drawing views with the flat pattern from the sheet metal you need to check if the drawing views can be updated successfully after running the code. Hope this helps.
					
				
			
			
				
	If this solves the problem please click ACCEPT SOLUTION so other people can find it easily.
Rocky Zhang
Inventor API PD
Manufacturing Solutions
Autodesk, Inc.