Solved! by Patchy. See the answer in context.
the subtract command subtracts the whole pink solid and leaves the empty shape in the sphere, I just need to cut the part that sticks out from the bottom of the sphere!
Thanks for the challenge, it was not as EZ as I thought.
I had to make a copy of the model, SUBTRACT the unwanted parts, then SEPARATE them, after that I move them back to the original position.
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